PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KXZ51238.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium
Family C3H
Protein Properties Length: 706aa    MW: 69738 Da    PI: 6.1651
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KXZ51238.1genomeGPGRPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH22.12.7e-072950526
                --SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH  5 lCrffartGtCkyGdrCkFaHg 26
                 C+ f+r+G C++Gd C+FaHg
  KXZ51238.1 29 ACPEFRRNGCCRRGDACPFAHG 50
                7********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501036.221113IPR000571Zinc finger, CCCH-type
Gene3DG3DSA:4.10.1000.108.5E-52252IPR000571Zinc finger, CCCH-type
SuperFamilySSF902298.01E-52354IPR000571Zinc finger, CCCH-type
SMARTSM003565.9E-62451IPR000571Zinc finger, CCCH-type
PROSITE profilePS5010313.8922452IPR000571Zinc finger, CCCH-type
PfamPF006421.9E-52950IPR000571Zinc finger, CCCH-type
Gene3DG3DSA:4.10.1000.103.9E-55789IPR000571Zinc finger, CCCH-type
SMARTSM00356186083IPR000571Zinc finger, CCCH-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 706 aa     Download sequence    Send to blast
MFQFKCPFAH PGEKAKRRDP RKYRYSGTAC PEFRRNGCCR RGDACPFAHG VFECWLHPSR  60
YRTQMCTDGS SCKRRVCFFA HTESELRKPE EDPLWLQQQL QAELAAEQQV QQQIQALKVF  120
ANILGPNTST AGGQQAASNQ PPGLDMLKNL PSATLTQLLG AAQSPAGSGD GLLQLLQLVE  180
QQQAASAAGP PPAAAATPLA PAASAPANLA TLMSAVTAAA GAPGSASGGP GSGPDAQLKL  240
AQQLLQQFQQ QQTQQQQAQQ QQAQQQQAQQ QQGGQDALQA RLMAQLAGMA LQPQKSVDGE  300
AKASQAQAPA QAAQPPANAN LAMELLSFLA NQQQQAQQQQ QQQQHAAAQL EQQQQQLMAA  360
AAAALASASQ APQAQQPAPA PQPAAAAGAG SPPGMSPALL QQLSSMGLDL SALGIAPESQ  420
GSQAAASAPA PAAPAPQDPL SLLAAALGQG TAAAVPPPPA KLDVPAPAPP APRVSSGTSG  480
TPAAPAAALD PLSALLAAAA GQPGGAAGVS PAMLSSLLGQ LSMGGGAAAP SPTQAAPAQA  540
AAQQPPAPAA STPPLAPERS AGSVLSEGAT SAAGRQSPAP APGASTASPP AAAALPSDAG  600
GAAPQSPPTT AQHGVSPAAA SSAAAAPAAD GSGPNIASLL AGFYSKPEHM LTAQALLERM  660
AGGSTVGGLD PATMAALASM AGGAAPAPGP SSTGSGGEEA ASVSSA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A150GN800.0A0A150GN80_GONPE; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP601532
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25900.26e-43C3H family protein